Complex Systems at UCSB
Research Publications Members


Complexity & Robustness

Pathogen Induced Tolerance  abstract pdf 
S. P. Stromberg and J. M. Carlson, submitted

 

Using ICA and realistic BOLD models to obtain joint EEG/fMRI solutions to the problem of source localization abstract pdf 
T. Brookings, S. Ortigue, S. Grafton, and J. Carlson, NeuroImage, submitted

 

Spatial modeling of fire in shrublands using HFire: I. Model description and event simulation abstract pdf 
Peterson, S.E., Morais, M.E., Carlson, J.M., Dennison, P.E., Roberts, D.A., Moritz, M.A., and Weise, D.R. International Journal of Wildland Fire, submitted

Spatial modeling of fire in shrublands using HFire: II. Fire regime sensitivities abstract pdf 
Moritz, M.A., Morais, M.E., Dennison, P.E., Summerell, L.A. and Carlson, J.M. International Journal of Wildland Fire, submitted

Evolutionary Dynamics and Highly Optimized Tolerance  abstract pdf 
Zhou, T., Carlson, J.M., and Doyle, J. (2005) J. Theor. Bio. 236 , 438-447.

Wildfires, Complexity and Highly Optimized Tolerance abstract pdf
Moritz, M., Morias, M., Summerell, L., Carlson, J.M., and J. Doyle (2005) Proc. Nat. Acad. Sci.102, 17912-17917.

Robustness and the Internet: Theoretical Foundations abstract  pdf 
Doyle, J.C. S. Low, S., Carlson, J.M., Paganini, F., Vinnicombe, G., Willinger, W., and Parillo, P. (2005) Robust Design: A Repertoire of Biological, Ecological, and Engineering Case Studies (Santa Fe Institute Studies on the Sciences of Complexity) , Eric Jen, Editor, Oxford University Press.

Robustness and Fragility in Immunosenescence abstract  Small pdf  Large pdf
Stromberg SP, Carlson J (2006) PLoS Comput Biol 2(11): e160. doi:10.1371/journal.pcbi.002016
Three mechanisms for power laws on the Cayley tree abstract ps pdf
Brookings, T, Carlson, JM & Doyle, J (2005) Phys. Rev. E 72, article 056120.

Highly optimized tolerance and power laws in dense and sparse resource regimes abstract ps pdf
Manning, M, Carlson, JM & Doyle, J (2005) Phys. Rev. E 72, article 016108.

Design degrees of freedom and mechanisms for complexity abstract ps pdf
Reynolds, D, Carlson, JM & Doyle, J (2002) Phys. Rev. E 66, article 016108.

Mutation, specialization, and hypersensitivity in HOT abstract ps pdf
Zhou, T, Carlson, JM & Doyle, J (2002) Proc. Nat. Acad. Sci. 99 , 2049-2054.

Complexity and robustness abstract ps pdf
Carlson, JM & Doyle, J (2002) Proc. Nat. Acad. Sci. 99 , 2538-2545.

Highly Optimized Tolerance in epidemic models incorporating local optimization and regrowth abstract ps pdf
Robert, C, Carlson, JM & Doyle, J (2001) Phys. Rev. E 63 , article 056122.

Dynamics and changing environments in HOT abstract ps pdf
Zhou, T & Carlson, JM (2001) Phys. Rev. E 62, 3197-3204.

Power laws, HOT, and generalized source coding abstract ps pdf
Doyle, J & Carlson, JM (2000) Phys. Rev. Lett. 84, 5656-5659.

HOT: Robustness and design in complex systems abstract ps pdf
Carlson, JM & Doyle, J (2000) Phys. Rev. Lett. 84, 2529-2532.

HOT: A mechanism for power laws in designed systems abstract ps pdf
Carlson, JM & Doyle, J (1999) Phys. Rev. E 60, 1412-1427.


Multi-scale Modeling

Shear strain localization in elastodynamic rupture simulations  abstract pdf
E.G. Daub, M.L. Manning, and J.M. Carlson, Geophysical Research Letters, in press

 

Constraining Earthquake Source Inversions with GPS Data 1: Resolution Based Removal of Artifacts   abstract pdf
Page, Morgan T., Susana Custódio, Ralph J. Archuleta, and J. M. Carlson, JGR - Solid Earth, in press.

 

A constitutive model for fault gouge deformation in dynamic rupture simulations  abstract pdf
E.G. Daub and J.M. Carlson, Journal of Geophysical Research, submitted

 

Strain localization in a shear transformation zone model for amorphous solids  abstract pdf
M.L. Manning, J.S. Langer, and J.M. Carlson, Phys. Rev. E, in press

 

Momentum transport in granular flows   abstract pdf
Lois, G., Lemaitre, A., and Carlson, J.M., Computers and Mathematics with Applications 55, 175-183 (2008)

 

Force networks and the dynamic approach to jamming in sheared granular media  abstract pdf 
Lois, G., and Carlson, J.M., Europhys. Lett. 80, 58001 (2007)

Spatial force correlations in granular shear flow I: numerical evidence  abstract pdf 
Lois, G., Lemaitre, A., and Carlson, J. M., Phys. Rev. E.76, 021302 (2007)

Spatial force correlations in granular shear flow II: theoretical implications abstract  pdf 
Lois, G., Lemaitre, A., and Carlson, J. M., Phys. Rev. E.76, 021303 (2007)
Microstructure and Modeling of Granular Materials abstract  pdf
G. Lois, thesis (2006)
Emergence of multi-contact interactions in contact dynamics simulations of granular shear flows  abstract   pdf
G. Lois, A. Lemaitre and J. M. Carlson, Europhysics Letters 76, 318 (2006)
Methodologies for Earthquake Hazard Assessment: Model Uncertainty and the WGCEP-2002 Forecast abstract  pdf
Page, M. T. and J. M. Carlson (2006) Bull. Seism. Soc. Am. 96, 5, doi: 10.1785/0120050195
Numerical Tests of Constitutive Laws for Dense Granular Flows abstract  pdf
G. Lois, A. Lemaitre and J. M. Carlson, Physical Review E 72, 051303 (2005).
Distinguishing Barriers and Asperities in Near-Source Ground Motion abstract  pdf
Page, M. T., E. M. Dunham, and J. M. Carlson (2005) J. Geophys. Res. - Solid Earth.  110, B11302, doi:10.1029/2005JB003736.

Boundary lubrication with a glassy interface abstract pdf
A. Lemaitre and J. M. Carlson, Physical Review E 69, 61611 (2004)

 
Near-source Ground Motion from Steady State Dynamic Rupture Pulses abstract pdf  supplement-pdf
Dunham, E & Archuleta, R (2004) Geophys. Res. Lett. 32, L03302, doi:10.1029/2004GL021793.
Dissipative interface waves and the transient response of a three dimensional sliding interface with Coulomb friction abstract  pdf
Dunham, E (2004) J. Mech. Phys. Solids. 53,327-357.

Evidence for a supershear transient during the 2002 Denali earthquake abstract   pdf
Dunham, E & Archuleta, R (2004) Bull. Seism. Soc. Am. 94, S256-S268.

Coarse graining and control theory model reduction ps  pdf
Reynolds, D.E. (submitted to J. Stat. Phys., 2003).

A Supershear Transition Mechanism for Cracks abstract  pdf
Dunham, E, Favreau, P, & Carlson, JM (2003) Science 299, 1557-1559.

Rupture pulse characterization: Self-healing, self-similar, expanding solutions in a continuum model of fault dynamics abstract  ps  pdf
Nielson, SB & Carlson, JM (2000) Bull. Seismol. Soc. Amer. 90, 1480-1497.

Influence of friction and fault geometry on earthquake rupture abstract   ps   pdf
Nielson, SB, Carlson, JM & Olsen, KB (2000) J. Geophys. Res.-Solid Earth 105, 6069-6088.

Bifurcations from steady sliding to slip in boundary lubrication abstract  ps   pdf
Batista, AA & Carlson, JM (1998) Phys. Rev. E 57, 4986-4996.

Constitutive relation for the friction between lubricated surfaces abstract  ps   pdf
Carlson, JM & Batista, AA (1996) Phys. Rev. E 53, 4153-4165.